The Map of Pages included in the upload. 

Hello.I would try to export the entire site completely, not just the changes.

I have been doing that. 
Also, while previewing some of the pages they arent showing up at all.  Receiving errors that "This page cannot be found" 

This situation occurs when you upload the site to the hosting and to disk?

This situation occurs with both.  

Perhaps someone from @Incomedia can help in your situation.

Alliance, have you done a ctrl+preview before attempting the export?

After this if the site appears complete in the preview, please go to step5 export, export Website to disk but use a new directory/folder. When complete if you browse to this new folder in Windows explorer and select the index file, is the website complete in your local browser?

If this doesn't work you should consider creating a good backup (iwzip via step5 export, export project) and then importing the new iwzip to see if it clears out the potential corruption (this will not overwrite your existing project).

Your website seems fairly complex. Hopefully you have many backups (iwzip) to fall back on, especially since you can now rename them on the fly (eg add incremental number or date). The iwzip is the only reliable backup for WX5.

I have imported a backup from about a week ago, but with that came the problem of the previewing system not working.  

I will try an even older copy to see if that works.

Holding Crtl and Pressing Preview Seemed to work. 

Exported The Files to a Fresh Folder.  The folder does not show the pages exported. This is where I am stuck at @esahc.

Hopefully @icomedia see's this.  I will be testing if an older version will work.